PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062048.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 352aa MW: 40738.1 Da PI: 7.5658

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.3	2.9e-14	48	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk++GF + ++++ ++ge++ C++ kr+++++ + +++ ++ ++Ckak++ +++kdg++++t+++l+H+H+l XP_028062048.1 48 SFYAKYAKHLGFAIAYRTQNIG-QDGEVKYFGIECTQARKRTKRSEV--HPLEPSLSSFIECKAKVRATLQKDGRFKLTTVVLKHTHDLI 134 5***********99988876.8999**********999876..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MDIDSNNPSF NGSEEVEEAE NNPSLNEIGE VEEPKKGMCF SSKQEVYSFY AKYAKHLGFA 60 IAYRTQNIGQ DGEVKYFGIE CTQARKRTKR SEVHPLEPSL SSFIECKAKV RATLQKDGRF 120 KLTTVVLKHT HDLIPSDSRH FAMNKRILTP VKRRLEINDE AGIGVARNFH SIVVEAGGYE 180 ALTFDERDAR NHIQSMRRLR FRVGDTKSVA LYFHRMQQQN SNFYSAIDID EDGRMRNLFW 240 ADAKRVNHHG QSILLSCGLL SNENTETFVW LFREWLSCMS DVPPKAIITD QCRAMQNAIE 300 VVSSQVRHRW CLWHIMKKIP EKLRGYAQYE SIKFALQNAV YDCFTKDEFD EE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MDIDSNNPSF NGSEEVEEAE NNPSLNEIGE VEEPKKGMCF SSKQEVYSFY AKYAKHLGFA  60
IAYRTQNIGQ DGEVKYFGIE CTQARKRTKR SEVHPLEPSL SSFIECKAKV RATLQKDGRF  120
KLTTVVLKHT HDLIPSDSRH FAMNKRILTP VKRRLEINDE AGIGVARNFH SIVVEAGGYE  180
ALTFDERDAR NHIQSMRRLR FRVGDTKSVA LYFHRMQQQN SNFYSAIDID EDGRMRNLFW  240
ADAKRVNHHG QSILLSCGLL SNENTETFVW LFREWLSCMS DVPPKAIITD QCRAMQNAIE  300
VVSSQVRHRW CLWHIMKKIP EKLRGYAQYE SIKFALQNAV YDCFTKDEFD EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-49	FAR1 family protein