PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061659.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 843aa MW: 97424.3 Da PI: 7.2275

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.4	4.3e-22	73	163	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+YAk GFs+r+++ +k k+n +++r +vCske +r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH+++ XP_028061659.1 73 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRSWVCSKERYRQSKYLEvEERKREPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSMV 163 5******************96666.9***********998867888899************999*************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
MCQMEDNTEQ NKNNIIYELV DDDGNDGEYN IHNEDDIVNS NNIPTERDIK RLDELTEKDV 60 FEMTFDSEEN GERFYNSYAK VKGFSIRRDQ LYKDKNNMVI SRSWVCSKER YRQSKYLEVE 120 ERKREPKQLT RVGCRACFRI KYNRSTSKYE VNEFFKEHNH SMVGPLGVQF LRSHRNVTSA 180 DKAQGNAMHH VGMRTSHIMD FAAQQAGGYE NVGFIQKDMY NHFGTERRAQ VVDGDAEGAL 240 AYLCGKEEQD PMFYYKYDVD EENRLNNLFW TDGGSRTDYL YFGDVLMFDT IYRTNAYNEP 300 FVILQDYLYF GDVLMFDTTY RTNAYNKPFV ILQGVSNHIQ TTIFGCALLA SETVETYIWV 360 LEKFFDAMDH KMPLSVIIDE DKAMCRAIKT VMPTARHRLC KWHLKMNALS NIHIEGFLHS 420 FEKCMSMQCT QEMFELEWKN LVDKYGLHNN KWIADVYCKH TLWAEAYLHG HFFAGAKSTQ 480 CCESMNAFLN RFLKVRLRLF EFVRAYDRAL ARLRHNEAKA QSETENTTPI LSTGMKRIEK 540 HAADIFTRAI FFKFREQIKS EQVLFMSGKT DIEDIHVYYL SMYTHPESTW NVQYRPSDHA 600 MKCSCLYFES CGIPCSHMVS IMKMEHLKEI PSSCILQRWT KNVKSSTLLG KTPFPEWVTQ 660 TTRFGALSSA CTEMCYYASH LTNGYEEARD AVTKLTCRMK DLYVQHVEEN GTKGKANVKG 720 TCLHFGVGDP PFTKTKGSRS VAKDKFSKPR KCGHCRGTGH TRNRCPKLEN ENIDSFPTQD 780 TYVSGASILH QKGGFNVDLT FANSDYNIMG YGSSGHPTFV HTCSETPDNI YGHVVGGTIG 840 LSK

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

MCQMEDNTEQ NKNNIIYELV DDDGNDGEYN IHNEDDIVNS NNIPTERDIK RLDELTEKDV  60
FEMTFDSEEN GERFYNSYAK VKGFSIRRDQ LYKDKNNMVI SRSWVCSKER YRQSKYLEVE  120
ERKREPKQLT RVGCRACFRI KYNRSTSKYE VNEFFKEHNH SMVGPLGVQF LRSHRNVTSA  180
DKAQGNAMHH VGMRTSHIMD FAAQQAGGYE NVGFIQKDMY NHFGTERRAQ VVDGDAEGAL  240
AYLCGKEEQD PMFYYKYDVD EENRLNNLFW TDGGSRTDYL YFGDVLMFDT IYRTNAYNEP  300
FVILQDYLYF GDVLMFDTTY RTNAYNKPFV ILQGVSNHIQ TTIFGCALLA SETVETYIWV  360
LEKFFDAMDH KMPLSVIIDE DKAMCRAIKT VMPTARHRLC KWHLKMNALS NIHIEGFLHS  420
FEKCMSMQCT QEMFELEWKN LVDKYGLHNN KWIADVYCKH TLWAEAYLHG HFFAGAKSTQ  480
CCESMNAFLN RFLKVRLRLF EFVRAYDRAL ARLRHNEAKA QSETENTTPI LSTGMKRIEK  540
HAADIFTRAI FFKFREQIKS EQVLFMSGKT DIEDIHVYYL SMYTHPESTW NVQYRPSDHA  600
MKCSCLYFES CGIPCSHMVS IMKMEHLKEI PSSCILQRWT KNVKSSTLLG KTPFPEWVTQ  660
TTRFGALSSA CTEMCYYASH LTNGYEEARD AVTKLTCRMK DLYVQHVEEN GTKGKANVKG  720
TCLHFGVGDP PFTKTKGSRS VAKDKFSKPR KCGHCRGTGH TRNRCPKLEN ENIDSFPTQD  780
TYVSGASILH QKGGFNVDLT FANSDYNIMG YGSSGHPTFV HTCSETPDNI YGHVVGGTIG  840
LSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein