PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061600.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 321aa MW: 35749.8 Da PI: 8.2947

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd++l+ +++++G g+W + +++ g+ R++k+c++rw +yl XP_028061600.1 14 RGTWTPEEDQKLLAYIEEHGHGSWPALPAKAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	51.6	2.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_028061600.1 67 RGKFSLQEEQSIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNSHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGRSPCCENV GLKRGTWTPE EDQKLLAYIE EHGHGSWPAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQSIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNS HLKKRLTKMG 120 IDPVTHKPKT DSLNPGQLKV AATLSHIAQW ESARLEAEAR ATRIVRESTL LRSFCSSSAQ 180 LILNKANALP PLPPPPLPLQ PLCLDVLTAC KGAWLTTLLK ENGSTITGTL EAPTSTLNFS 240 DKQLLIPNLG KSNNSIGEVK ESMENTVLVP NFMEGLTDLL IENSHDHLDH DLNYFEENNN 300 YWNNILNLVN STSPSIGSPV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	2e-99	MYB family protein