PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061355.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26382.9 Da PI: 9.1619 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.7 | 1.7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRrngi+KKA+EL vLCda+v++i+fs+tgk++ey+s XP_028061355.1 9 KRIENPTNRQVTYSKRRNGIFKKAQELAVLCDAKVSLIMFSNTGKFHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 87.1 | 3.5e-29 | 71 | 166 | 1 | 96 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+ g +l+++++e++q++l+kLk+ +++L+re+ h++Ge+L++Ls++eL Leq+++ sl+ +R++K+++l++q+e+ +kk ++l+e++ +L XP_028061355.1 71 YQKALGIDLWSTHYERMQEHLKKLKEINNKLRREIGHRIGEELNDLSIEELGGLEQKMDASLTIVRERKYHVLKTQTETYRKKVRNLEERHGNLL 165 78899999***********************************************************************************9997 PP K-box 96 k 96 XP_028061355.1 166 L 166 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRGKIEIKR IENPTNRQVT YSKRRNGIFK KAQELAVLCD AKVSLIMFSN TGKFHEYISP 60 SITTKKIYDE YQKALGIDLW STHYERMQEH LKKLKEINNK LRREIGHRIG EELNDLSIEE 120 LGGLEQKMDA SLTIVRERKY HVLKTQTETY RKKVRNLEER HGNLLLDYEA KCEDPQYGLV 180 DNDGDYDSAA ALSNGVSNLY AFRLQPSHPN LHHGGGGGVP GGFGSHDLRL A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 9e-78 | MIKC_MADS family protein |