PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028061042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 325aa MW: 37525.2 Da PI: 10.3947 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.8 | 1e-26 | 51 | 101 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nr vtfskRr g+lK A+E+SvLCda+v +iifs +gkl+eys+ XP_028061042.1 51 KRIENKINRPVTFSKRRSGLLKNAHEISVLCDADVGLIIFSAKGKLFEYST 101 79***********************************************96 PP | |||||||
2 | K-box | 94.6 | 1.6e-31 | 121 | 216 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++ + +++ e+ kL++++e L r+qRh++GedL++Ls+keLq+Le+qL+++lk+iRs+Kn+l+ ++i+elq k k+l eenk L kk++ XP_028061042.1 121 QLVAADIDSQVRWTLEHVKLQARLEVLDRTQRHFMGEDLDTLSVKELQSLEHQLDSALKHIRSRKNQLMNDSISELQTKDKALLEENKLLAKKIK 215 555555566789*********************************************************************************98 PP K-box 100 e 100 e XP_028061042.1 216 E 216 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MAQSQAYFHQ TQKFQLPRIA HQNTTTFFNP SCPNRPPLLH FSRRQRQVAL KRIENKINRP 60 VTFSKRRSGL LKNAHEISVL CDADVGLIIF SAKGKLFEYS TTSCMERILE RYERYSYAER 120 QLVAADIDSQ VRWTLEHVKL QARLEVLDRT QRHFMGEDLD TLSVKELQSL EHQLDSALKH 180 IRSRKNQLMN DSISELQTKD KALLEENKLL AKKIKEKEGK ALARHAQLEQ QNQDPAQIRF 240 TPLSLRKTHH LIMRKTSTVL ANTLKAKGCI SKELNLKKLE EQHYTGIPTK SKVITDGILN 300 IVISTDCNND SSRFFFAPPI RPPST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 7e-78 | MIKC_MADS family protein |