PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 184aa MW: 20445.2 Da PI: 9.4031 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 55.8 | 8.7e-18 | 77 | 127 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 e+++s e l+++F+l+ dAA++L+ + ++LK +CR++ I+RWP+Rk +++ XP_028060864.1 77 EDSLSREILEQHFHLTCLDAASKLNFSESTLKHRCRKLDISRWPSRKRNKV 127 7899*******************************************8876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MMQHVRVTKS STNEKLDLRL DILQTTRSPP HPQARQNGGL IENGSNVISA CQSHNAVVFS 60 EIEDTREPSK IKSGKKEDSL SREILEQHFH LTCLDAASKL NFSESTLKHR CRKLDISRWP 120 SRKRNKVKLV DESIPSAGAN DPTLSTSPSL LPTVVVLDQP KPSSFELQRE KGKSLCSTTE 180 VGFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 3e-11 | Nin-like family protein |