PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060819.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 276aa    MW: 32437.8 Da    PI: 7.1648
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.43e-151791090
            FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    +GFs++k+k ++ + +++i + +f C keg++ +e+   e+++ +r e  t+Ck  ++++ e d+ w+vt+++ +HnHela
  XP_028060819.1  1 MGFSIQKEKPRYYSGSKNIRQCEFLCCKEGFKVDEDPF-EEKKLNRLEIITSCKVFFRLTVE-DEIWRVTTFNPKHNHELA 79
                    7*********9999********************9999.99999*****************9.****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGFSIQKEKP RYYSGSKNIR QCEFLCCKEG FKVDEDPFEE KKLNRLEIIT SCKVFFRLTV  60
EDEIWRVTTF NPKHNHELAL QSERHLLRSS RHISKPKAGV IDSMVNASVS AKNAYSYLRE  120
EVEGNENVGF TKRDCYNYVN KQKMTMISAR DAQSLLNHFK QKHTEDPMFF FTIQVDQENR  180
MTNFFWRDGR SRVDYDCFGD VVVFYTTYPT NKYNLICAPF VGVNHHWQNV IFGCAFLLDE  240
TTDSFIWLFK SFLESMGNRS PVTIFTDQDQ CNALEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-59FAR1 family protein