PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060781.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 28729.4 Da PI: 7.7919 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 78.1 | 1.7e-24 | 86 | 172 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFs+rk k ++ + +++i +++f Cskeg++ +e+ ek++ +r etrtgCka +++ e dg w+vt ++ eHnHela XP_028060781.1 86 LYNNYALRMGFSIRKGKPRYYSGSKNIRQHQFLCSKEGFKVDEDPC-EKKKLNRLETRTGCKAFIRLIVE-DGIWRVTAFNPEHNHELA 172 6******************999*******************99988.99999***************999.****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGLQGLMLAS EMKSPKSPSV GESNDDNQSK NFDIKSSSSL DIFSEINTSS DAERSEHNCM 60 FVARQENSDD SLLDKVVCSE DEEYALYNNY ALRMGFSIRK GKPRYYSGSK NIRQHQFLCS 120 KEGFKVDEDP CEKKKLNRLE TRTGCKAFIR LIVEDGIWRV TAFNPEHNHE LALQSERHLL 180 RSACHISKLK AGVIDSMVNA GISTKNAYPY LREEVRGNEN VGFTKRDCYN YVNKQKMMMT 240 SAGDAQSLLN HLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-26 | FAR1 family protein |