PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060630.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 460aa MW: 51260.2 Da PI: 4.5652

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	2.9e-27	141	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_028060630.1 141 RYDSSLGLLTKKFINLIKHAENGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 206 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MSTSRASNMP TEPIMQQSQQ QPLKRQLPFT PMKPPLGDYY RFSPSVVDNR QKEPDAIVFK 60 SPPLKRKSET ADHEAESSDR NPSTGYAEPI SSPLQTPVSG KRGKAQRAPR IAKCNRAGSQ 120 TPVANVGSPS GNNLTPVGPC RYDSSLGLLT KKFINLIKHA ENGILDLNKA ADTLEVQKRR 180 IYDITNVLEG IGLIEKKLKN RIQWKGLDVS RPGEIDENVA TIQAEVENLS IEEHKVDEQI 240 REMQERLREL SENERNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVEY 300 PQRRYRIVLR STMGPIDVYL VSQFEEKFEE INGDEASPSI PLTSGFDGNP AAPMVTEESR 360 NDTEMQGQED HRLCSNINAS QDFVSGIMKI VPEVDSDADY WLLPDGDVSI TDMWTEPGVE 420 WNEFGTIQDD YAMADVSTPH PQTPPSSTTE VPSSANTAGR

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MSTSRASNMP TEPIMQQSQQ QPLKRQLPFT PMKPPLGDYY RFSPSVVDNR QKEPDAIVFK  60
SPPLKRKSET ADHEAESSDR NPSTGYAEPI SSPLQTPVSG KRGKAQRAPR IAKCNRAGSQ  120
TPVANVGSPS GNNLTPVGPC RYDSSLGLLT KKFINLIKHA ENGILDLNKA ADTLEVQKRR  180
IYDITNVLEG IGLIEKKLKN RIQWKGLDVS RPGEIDENVA TIQAEVENLS IEEHKVDEQI  240
REMQERLREL SENERNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVEY  300
PQRRYRIVLR STMGPIDVYL VSQFEEKFEE INGDEASPSI PLTSGFDGNP AAPMVTEESR  360
NDTEMQGQED HRLCSNINAS QDFVSGIMKI VPEVDSDADY WLLPDGDVSI TDMWTEPGVE  420
WNEFGTIQDD YAMADVSTPH PQTPPSSTTE VPSSANTAGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-145	E2F/DP family protein