PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060471.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 279aa    MW: 32050.3 Da    PI: 8.8537
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.6e-35141062103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+ye+++d++ +++isws++++sfvv+++ efa+++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+         weF+++ F +g+ +ll++
  XP_028060471.1  14 FLVKTYEMVDDHSSDSVISWSQSNKSFVVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFSNEDFIRGQPHLLKN 99 
                     9***************************************************************9998.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k +
  XP_028060471.1 100 IHRRKPK 106
                     ****975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDKTQCSSNV LPPFLVKTYE MVDDHSSDSV ISWSQSNKSF VVWNPPEFAR DLLPRFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFSNEDFI RGQPHLLKNI HRRKPKEFAP SIPEKNITCL  120
TRLDHNRALG QISERIHVHV GDVKNVIIWR NHSSTQYPDV NHATVSTGAA HKPVRELVGD  180
NNWYEFITTV QQRGAVIIQA RKLSSALFAA SSTCDHIRDW VLGTPKGTWV FLYYSIASYV  240
INETNSNAGL KIDEFSRGKM DATAKELMEE KSLAYSCLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.15e-52HSF family protein