PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060462.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 343aa MW: 35712.6 Da PI: 9.1943

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	80	139	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_028060462.1 80 EAALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 139 7789*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MVFPSIPAYL DPSNWQQQQP NPQTGGGTGG NPHLLLPPPP PPPPPTPAQT HAGSGGPGSG 60 SIRPGSMADR ARMANIPMPE AALKCPRCDS TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG 120 GALRNVPVGG GCRRNKRSKG SSSSKSPVSS GDGQTSSGGS SSAISSNSTG TASLLGLPQQ 180 MKFMSPLSQL SEYGGGGGGD IGLNYSGISV PSDMNFQLPS GSFGGGSYFL GGGEQWRLQT 240 PPPQISSLMG LDFPAGLYPF QGGLEPPSYG GEGSHVRPKI SGSGLSPQVG SSLKMEDNQE 300 LNLSRQFLGI PGNDQFWSGT TGTNAWTDLS GFTSSSTSNN NAL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MVFPSIPAYL DPSNWQQQQP NPQTGGGTGG NPHLLLPPPP PPPPPTPAQT HAGSGGPGSG  60
SIRPGSMADR ARMANIPMPE AALKCPRCDS TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG  120
GALRNVPVGG GCRRNKRSKG SSSSKSPVSS GDGQTSSGGS SSAISSNSTG TASLLGLPQQ  180
MKFMSPLSQL SEYGGGGGGD IGLNYSGISV PSDMNFQLPS GSFGGGSYFL GGGEQWRLQT  240
PPPQISSLMG LDFPAGLYPF QGGLEPPSYG GEGSHVRPKI SGSGLSPQVG SSLKMEDNQE  300
LNLSRQFLGI PGNDQFWSGT TGTNAWTDLS GFTSSSTSNN NAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	4e-37	Dof family protein