PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060450.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 302aa MW: 34092.6 Da PI: 6.5755

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	251	284	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_028060450.1 251 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 284 469*****************************87 PP
2	ELK	26.3	1.7e-09	205	226	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_028060450.1 205 ELKIELKQGFRSRIEDVREEIL 226 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MQEQGLVMMG SGGGGGGGGG SGIGGLMDFS GDQYTQLKAE IATHPLYDQL LAAHVACLRV 60 ATPIDQLPLI DAQLSQSQHL LRSYASQHHH HNPPLSPHER QELDNFLAQY MFVLCSFKEQ 120 LQQHVRVHAV EAVMACREIE QNLQVLTGIT LGEGTGATMS DDEDELQMDF SLDQTVAEGH 180 DMMMGFGPLL PTESERSLME RVRQELKIEL KQGFRSRIED VREEILRKRR AGKLPGDTTS 240 VLKNWWQQHA KWPYPTEDDK AKLVEETGLQ LKQINNWFIN QRKRNWHSNS QSATALKSKR 300 KR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	302	RKRNWHSNSQSATALKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-163	TALE family protein