PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | E2F/DP | ||||||||
Protein Properties | Length: 299aa MW: 33299.8 Da PI: 6.6381 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 69.3 | 4.5e-22 | 66 | 145 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 +Lr+++ +++k+e+ g++t++eva+e+++e d+kn+rRR+YD+lNVL+a+++i k +k+ei wkg XP_028060413.1 66 GGLRQFSII---ICKKVESkGKTTYSEVADEIIAEltatnnnsavsldefDEKNIRRRVYDALNVLMAMDIIIK-DKKEIWWKG 145 589999988...9***9999******************************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MDNGCLGDIF DGFGQKHSGG EGSIPALTSD NSTAAAYKDP QISNQLSIHH DGSATKKKRV 60 SRIIGGGLRQ FSIIICKKVE SKGKTTYSEV ADEIIAELTA TNNNSAVSLD EFDEKNIRRR 120 VYDALNVLMA MDIIIKDKKE IWWKGLHNAN VKDMEEIKAL RVKAMNRIEK KAAYLKELEE 180 QIAGLQNLML RNQQLLKSGN APFGGFSLPF IVVRTNPHAT VEIEISEDMQ LVHLDFNSTP 240 FSLHDDAYIL KLLWRYQLPE STRISPSSSV LSSSSIDVAS GGTKPFYWNS ETETAKVYE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 82 | KKKRVSRIIGGGLRQFSIIICKKVESK |
2 | 56 | 84 | KKKRVSRIIGGGLRQFSIIICKKVESKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 7e-64 | E2F/DP family protein |