PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060152.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 421aa MW: 47112.2 Da PI: 4.9344

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.6e-35	97	188	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk+++++ed++++ +isw+++++sfvv+d+++f++++LpkyFkh+nf+SF+RQLn+YgFkk+++++ weF+++ F+ gkk+ll++ XP_028060152.1 97 FLKKTFHMVEDPDTDIIISWTASQKSFVVWDHQQFSTNLLPKYFKHNNFSSFIRQLNTYGFKKIDSDR---------WEFANEAFQGGKKHLLKN 182 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_028060152.1 183 IERRKH 188 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
METLKIKQEN IVAIDDDIPG GGGGGLIEEE EEKTVKVVEV KEEAVVLVDD DCVSGEGVVL 60 VGGGGGGGGG DSMPCSPPNS SAPKPMEGLH ETGPSPFLKK TFHMVEDPDT DIIISWTASQ 120 KSFVVWDHQQ FSTNLLPKYF KHNNFSSFIR QLNTYGFKKI DSDRWEFANE AFQGGKKHLL 180 KNIERRKHNP QNVQQPGVMR SCLNSANFGI ETELEKLRND RMKMKMEIMK LKQQQENTES 240 YFAAVKERIG YTECKQQDVL IFMAKAFSNP AFFHQFIHLM RPKKELCNDQ IAKKQRLAAA 300 SQSNEDQVTN KNQEELTTKH SEVERLFSAL LDDESSPSQD QKINAAPGPL SPDLSSDNYI 360 LWEKLLEDGL ICENGSAQVE AELVQHQSKI VLQLENLIAK PPDWASNVKD LGEQVSCLES 420 K

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

METLKIKQEN IVAIDDDIPG GGGGGLIEEE EEKTVKVVEV KEEAVVLVDD DCVSGEGVVL  60
VGGGGGGGGG DSMPCSPPNS SAPKPMEGLH ETGPSPFLKK TFHMVEDPDT DIIISWTASQ  120
KSFVVWDHQQ FSTNLLPKYF KHNNFSSFIR QLNTYGFKKI DSDRWEFANE AFQGGKKHLL  180
KNIERRKHNP QNVQQPGVMR SCLNSANFGI ETELEKLRND RMKMKMEIMK LKQQQENTES  240
YFAAVKERIG YTECKQQDVL IFMAKAFSNP AFFHQFIHLM RPKKELCNDQ IAKKQRLAAA  300
SQSNEDQVTN KNQEELTTKH SEVERLFSAL LDDESSPSQD QKINAAPGPL SPDLSSDNYI  360
LWEKLLEDGL ICENGSAQVE AELVQHQSKI VLQLENLIAK PPDWASNVKD LGEQVSCLES  420
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	4e-89	HSF family protein