PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 147aa MW: 17004.5 Da PI: 10.3086 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74 | 1.7e-23 | 15 | 114 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kv t+sd + rl +pk a++h + + ++ l +ed +g++W++k++++k+s++yvlt+ W++Fvk+++L +gD+v F ++ s+ XP_028060144.1 15 FDKVVTRSDIKEY-RLAIPKYQAKKHfpqhvaS--SSKGAFLCMEDNEGKVWRFKYSFWKRSQGYVLTREWNQFVKEKRLSAGDVVSFLRSTGSD 106 7788877666666.6************988532..346778************************************************886688 PP E..EEEEE CS B3 90 felvvkvf 97 ++l++ + XP_028060144.1 107 KQLYIDCR 114 88888766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MKEGMLLFPR QEKLFDKVVT RSDIKEYRLA IPKYQAKKHF PQHVASSSKG AFLCMEDNEG 60 KVWRFKYSFW KRSQGYVLTR EWNQFVKEKR LSAGDVVSFL RSTGSDKQLY IDCRPQNQSG 120 IAAKTEPVET TQNGQTVKLF GVNISTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13260.1 | 4e-40 | RAV family protein |