PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059635.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 168aa    MW: 18733.7 Da    PI: 7.8274
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260142.81e-4461051100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+CakdC++apyfp+++p+kfa+vhk+FGasnv+k+l+++p ++r da+sslvyeA ar+rdPvyG++g+i++lq+q++qlk +la
  XP_028059635.1   6 PCASCKMLRRRCAKDCIFAPYFPSHDPHKFAIVHKIFGASNVSKMLQEIPVHQRADAVSSLVYEASARTRDPVYGCMGMISHLQNQVAQLKMQLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_028059635.1 101 VAQAE 105
                     99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MAGNSPCASC KMLRRRCAKD CIFAPYFPSH DPHKFAIVHK IFGASNVSKM LQEIPVHQRA  60
DAVSSLVYEA SARTRDPVYG CMGMISHLQN QVAQLKMQLA VAQAEMLCIH MQHEPAIPAP  120
ESFDRADKSF LLQNNLPQCL NFVSPTSYVI QDSLKSESLL GHHDMVSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.17e-71LBD family protein