PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 25992.8 Da PI: 9.2713 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.7 | 5.5e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrngilKKA+ELSvLCdaeva+iifs++gklye++s XP_028059218.1 9 KRIENKINRQVTFAKRRNGILKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 98.2 | 1.2e-32 | 70 | 155 | 15 | 100 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++e+ +Lk ++e Lq++qR+llGedL++L+ keL++Le+qLe+slk+iRs+K++++l+q+ +lqkke+ l e nkaLr+klee XP_028059218.1 70 QNGYHEYLRLKTRVEILQQSQRNLLGEDLGPLTTKELEHLEHQLENSLKQIRSTKTQFMLDQLADLQKKEQVLAESNKALRMKLEE 155 78899******************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGILK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SRYPLHVLKQ NGYHEYLRLK TRVEILQQSQ RNLLGEDLGP LTTKELEHLE HQLENSLKQI 120 RSTKTQFMLD QLADLQKKEQ VLAESNKALR MKLEESTMEP LQLSWEAGEQ SIPYNNQIPA 180 RSEGFYQPLR LNSSLQIGYN PVGPDELHVA APTAQNVNGF IPGWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 4e-90 | MIKC_MADS family protein |