PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059188.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SBP

Protein Properties

Length: 513aa MW: 56406.5 Da PI: 7.9084

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.7	1.2e-41	154	229	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCevh+k+++v+v+g eqrfCqqCsrfh+l efD++krsCr+rLa+hnerrrk++ XP_028059188.1 154 CQVYGCKKDLSSSKDYHKRHKVCEVHAKTAKVIVNGNEQRFCQQCSRFHSLAEFDDGKRSCRKRLAGHNERRRKPH 229 **************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MESWSYVSQG KGFVSDDSIS APDVFGRGKN GLMGWELKTP CNYDSNLVEN QGFVELGFPE 60 MPRKSWPENN LNERICTPIT SMTNAFSGED ESSSKFSSSV VESNSRDSSF IDLKLGRIAD 120 DFRSSQTAPV LSSSESLLPT KRVRAGLSSQ TPFCQVYGCK KDLSSSKDYH KRHKVCEVHA 180 KTAKVIVNGN EQRFCQQCSR FHSLAEFDDG KRSCRKRLAG HNERRRKPHV GTHSGRSGRF 240 FQSYNGSMIT PSSFICQDIL PSNILHPQKY DTNDWNGRIK LENGANYSPP SAIPITNGHL 300 HPKSLFPHGF EKHCPFLANG VNSATGRDFN ENSNRYTHYL GSSNSVSGSL IHNTSIGSED 360 FALFNSGSTV QGIGMSGCGR ALSLLSSQSQ NSSSHSSGIP MAQIVSGSHA NYNVGQISGK 420 ILGVSSQASI NGVTANKFNS VEENHFNPIL ISDDGDAVNF TDGMFQGSQY INDKDRLSCE 480 DGSTIDLLKL SSQLQRVEHQ RQFMHVKRES DAF

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MESWSYVSQG KGFVSDDSIS APDVFGRGKN GLMGWELKTP CNYDSNLVEN QGFVELGFPE  60
MPRKSWPENN LNERICTPIT SMTNAFSGED ESSSKFSSSV VESNSRDSSF IDLKLGRIAD  120
DFRSSQTAPV LSSSESLLPT KRVRAGLSSQ TPFCQVYGCK KDLSSSKDYH KRHKVCEVHA  180
KTAKVIVNGN EQRFCQQCSR FHSLAEFDDG KRSCRKRLAG HNERRRKPHV GTHSGRSGRF  240
FQSYNGSMIT PSSFICQDIL PSNILHPQKY DTNDWNGRIK LENGANYSPP SAIPITNGHL  300
HPKSLFPHGF EKHCPFLANG VNSATGRDFN ENSNRYTHYL GSSNSVSGSL IHNTSIGSED  360
FALFNSGSTV QGIGMSGCGR ALSLLSSQSQ NSSSHSSGIP MAQIVSGSHA NYNVGQISGK  420
ILGVSSQASI NGVTANKFNS VEENHFNPIL ISDDGDAVNF TDGMFQGSQY INDKDRLSCE  480
DGSTIDLLKL SSQLQRVEHQ RQFMHVKRES DAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-47	SBP family protein