PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059155.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 406aa MW: 45519 Da PI: 9.8729

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.2	1.2e-29	66	187	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsss 87 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl + k++i+el+ ++ ++ c s ++ XP_028059155.1 66 FGGKDRHSKVSTIRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDATKHEIDELPPLQIPPG--CftqfhqptlV-----SHQE---L 150 689*************************************************************77777..33233222221.....2222...1 PP TCP 88 g...................................k 89 + + XP_028059155.1 151 NnapqssfssffssiptymkdggtqsllpnkegikiN 187 1111222335555555666655555555544444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MKSPPKVNLF PFRSMMREDD HKLRGKDFQA KVEGDTSNSK VTKAPSSSRQ WSAFKNPRIV 60 RVSRAFGGKD RHSKVSTIRG LRDRRIRLSV PTAIQLYDLQ DRLGLNQPSK VVDWLLDATK 120 HEIDELPPLQ IPPGCFTQFH QPTLVSHQEL NNAPQSSFSS FFSSIPTYMK DGGTQSLLPN 180 KEGIKINYNV GDNQSKTWDL DDTAMRAKLK EVEREANIVE KAKWMRTNEH QNHQDGSSSA 240 GYNAQVSAQN FFPIASNSSF PSLLNNAMPM PYNYYQWEPS NLSLSQFGSH GLLPQTEGAN 300 TGHLMPLPSS LALPSRSQLF LYPPASTPSI FPSYPPYITL GENDTRQLPT NHFQLWSSNS 360 QQALPNPLMS SLHSFTSPMS STSKVLHLQS QNDDQRQPNK GGNTGF

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MKSPPKVNLF PFRSMMREDD HKLRGKDFQA KVEGDTSNSK VTKAPSSSRQ WSAFKNPRIV  60
RVSRAFGGKD RHSKVSTIRG LRDRRIRLSV PTAIQLYDLQ DRLGLNQPSK VVDWLLDATK  120
HEIDELPPLQ IPPGCFTQFH QPTLVSHQEL NNAPQSSFSS FFSSIPTYMK DGGTQSLLPN  180
KEGIKINYNV GDNQSKTWDL DDTAMRAKLK EVEREANIVE KAKWMRTNEH QNHQDGSSSA  240
GYNAQVSAQN FFPIASNSSF PSLLNNAMPM PYNYYQWEPS NLSLSQFGSH GLLPQTEGAN  300
TGHLMPLPSS LALPSRSQLF LYPPASTPSI FPSYPPYITL GENDTRQLPT NHFQLWSSNS  360
QQALPNPLMS SLHSFTSPMS STSKVLHLQS QNDDQRQPNK GGNTGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-49	TCP family protein