PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 270aa MW: 28924.3 Da PI: 6.5157 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 206 | 251 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveY+k Lq XP_028059102.1 206 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 251 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MQPCGGVGGG GGGGVGGGGG GGELSRGLAR FKSAPSTWLE ALLESEEEEN DPLKPTTQCL 60 TQLLPTASSA PPSAAASYVS SADPGLFDSR GGGASSGLGF LRQNSSPAEF LTQMSSSDSY 120 LSNFGIPVNY DFLSSSIDVS PSSKRSREID PQHPSSKFSS QLKVEQSGQL HGGMSGLLDA 180 EMEKLLEDSV PCRVRAKRGC ATHPRSIAER VRRTRISDRI RKLQELVPNM DKQTNTADML 240 DEAVEYVKFL QRQIQELTEH QKKCKCLNKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 2e-73 | bHLH family protein |