PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059101.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 270aa    MW: 28924.3 Da    PI: 6.5157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.51e-12206251655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveY+k Lq
  XP_028059101.1 206 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 251
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MQPCGGVGGG GGGGVGGGGG GGELSRGLAR FKSAPSTWLE ALLESEEEEN DPLKPTTQCL  60
TQLLPTASSA PPSAAASYVS SADPGLFDSR GGGASSGLGF LRQNSSPAEF LTQMSSSDSY  120
LSNFGIPVNY DFLSSSIDVS PSSKRSREID PQHPSSKFSS QLKVEQSGQL HGGMSGLLDA  180
EMEKLLEDSV PCRVRAKRGC ATHPRSIAER VRRTRISDRI RKLQELVPNM DKQTNTADML  240
DEAVEYVKFL QRQIQELTEH QKKCKCLNKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-73bHLH family protein