PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059054.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 309aa    MW: 35758.5 Da    PI: 7.7994
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.96.3e-2725114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+++ kk k +++ ++r +vC+keg+r+ +k++   ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+
  XP_028059054.1  25 EFYNTYGGRMGFSIRRDYCKKDKFSNQLIHRLLVCNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgNGKYVVTDFKEKHNHDLV 114
                     6*******************************************999.9999*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEPENDCDWK PKLGMVFDSE QCAYEFYNTY GGRMGFSIRR DYCKKDKFSN QLIHRLLVCN  60
KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGNGKY VVTDFKEKHN HDLVSPECDH  120
MLLSQRKIST TQAIQLDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ  180
SLAYGEVGNV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFASFVGFNH HRETVTFGAA LLYDETAESF VWLFENFLPA MSRKAPKTLF  300
TDQDAAMAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-76FAR1 family protein