PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058968.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 579aa MW: 66910.1 Da PI: 6.4645

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.2	1.6e-24	64	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ ++GFs+rk++ +k+k+++eit+rtfvC+keg+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028058968.1 64 DFYNTYGGKMGFSIRKTYANKNKHTKEITSRTFVCYKEGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 154 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MAEMEEQRDG EQRIVGDGES GGDAMAGMRH CGDSEVMKES NIVDDCGWKP KVGMSFESEQ 60 AAYDFYNTYG GKMGFSIRKT YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV 120 RCGCGARFSI KLDRISGKYI ACDFVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELASQ 180 SGIPLRLAYE LFGRESGAIA SLGFIKLDQK NYLRSKRQKD LEYGETGSVL HYFRKKTVEN 240 PSFFYAVQLD CDDQISNIFW ANAQMIMDYA QFGDVVIFNT TYKLNNEHRP FGSFVRFNHH 300 RETVIFSATL MYDETAESFT WLFQIFLEAM SNKAPKTIFT DQDAAMAKAI PIVMPDTNHR 360 LCTWHLMQNV VKHVSSVFDD VGVKAVFSKF MHDIDDEEDF RIQWDQMLDK YDAFDNHWLE 420 QTFRVKEKWG WPYIMNSWAA GMSATQLSES FNAFLKDYLN CDHNLMEFFM HFERVLYKKR 480 FKELEAEYNL SQKLPRVSIP TLMLKQVAEI YTKTIFEEFQ NEYVQSIEAS IIGTINDSKS 540 TIFTIRTMVD GKKDKIVTMD RGSSLSCSCK KFEVKGILC

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MAEMEEQRDG EQRIVGDGES GGDAMAGMRH CGDSEVMKES NIVDDCGWKP KVGMSFESEQ  60
AAYDFYNTYG GKMGFSIRKT YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV  120
RCGCGARFSI KLDRISGKYI ACDFVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELASQ  180
SGIPLRLAYE LFGRESGAIA SLGFIKLDQK NYLRSKRQKD LEYGETGSVL HYFRKKTVEN  240
PSFFYAVQLD CDDQISNIFW ANAQMIMDYA QFGDVVIFNT TYKLNNEHRP FGSFVRFNHH  300
RETVIFSATL MYDETAESFT WLFQIFLEAM SNKAPKTIFT DQDAAMAKAI PIVMPDTNHR  360
LCTWHLMQNV VKHVSSVFDD VGVKAVFSKF MHDIDDEEDF RIQWDQMLDK YDAFDNHWLE  420
QTFRVKEKWG WPYIMNSWAA GMSATQLSES FNAFLKDYLN CDHNLMEFFM HFERVLYKKR  480
FKELEAEYNL SQKLPRVSIP TLMLKQVAEI YTKTIFEEFQ NEYVQSIEAS IIGTINDSKS  540
TIFTIRTMVD GKKDKIVTMD RGSSLSCSCK KFEVKGILC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein