PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058899.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 339aa    MW: 38106.8 Da    PI: 8.2542
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH231.4e-07128148526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f++ G+Ck Gd C FaHg
  XP_028058899.1 128 ACPEFRK-GQCKKGDLCEFAHG 148
                     7******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MMVITSETTR SNTIVHVPPW NLLDDPTATT VNLYRNATGD TTNFEALAAL HRYLPSNTTT  60
AAADSDFLSD DYHIPLGAFS CDHFRMFDFK VKKCARANSH DWTECPYLHA GEKARRRDPR  120
KFHYSGTACP EFRKGQCKKG DLCEFAHGVF ECWLHPSRYR TQPCKDGTHC RRRVCFFAHT  180
PDQLRVLPQT SPRTTDSYDG SLSRLGSSPT STLYSPSDSP NVNSVSELSW SMMKNLQIGK  240
VRMSMSPTSQ MGSECCSPRS PSGLRSGFSS LPSTPTRTPS RSGFDFWDQT CEEEPVMERV  300
ESGRDLRAKI YAKLSKENSL KRVDLAPGPD FGWVSELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-109C3H family protein