PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058861.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 302aa    MW: 35061.9 Da    PI: 8.2591
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.18.4e-2525114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+++ kk k +++ ++r +vC+keg+r+ ek++   ++++raetrtgC+a+l +k+++ +gk++vt+++++ nH+l+
  XP_028058861.1  25 EFYNTYGGRMGFSIRRDYCKKDKFTNQLIHRLLVCNKEGFRKVEKRD-PLSKNSRAETRTGCEARLYIKLHEgTGKYVVTDFKEKNNHDLV 114
                     6*******************************************999.9999********************9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEPENDCDWK PKLGMIFDSE QCAYEFYNTY GGRMGFSIRR DYCKKDKFTN QLIHRLLVCN  60
KEGFRKVEKR DPLSKNSRAE TRTGCEARLY IKLHEGTGKY VVTDFKEKNN HDLVSPECAH  120
MLPSQRKISA TQAIQLDLAA QFGLRLGQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ  180
SLAYGEVGNA LQYFKEKSLQ NPSFFYAVQL DNEKQITNMF WADAQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFASFVGFNH HRETVIFGVA LLYDETAESF VWLFENFLEA MSRKAPKTLF  300
TD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-73FAR1 family protein