PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 215aa MW: 25110.1 Da PI: 6.1709 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 10 | 55 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEd +l d+++ +G g+W++ a++ g++R++k+c++rw++yl XP_028058825.1 10 LWTVEEDRILMDYIRVHGEGRWNRLAEMTGLKRCGKSCRLRWNNYL 55 6********************************************7 PP | |||||||
2 | Myb_DNA-binding | 58.7 | 1.3e-18 | 62 | 106 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_028058825.1 62 GDFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 106 789******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MEREKGYKKL WTVEEDRILM DYIRVHGEGR WNRLAEMTGL KRCGKSCRLR WNNYLSPRIK 60 HGDFSEEEDD LIIRLHNLLG NRWSLIAGRV PGRTDNQVKN HWNTHLSKKL GVKKEITKLG 120 ASSQTISTKL IESDSVPMHA SSNPPSDSNI RAEEQKVDDN GYQSNVGFLE VEDQQRINES 180 YESPFWFPDD DLRLSTPSLM EILDEYSFDF VWHNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 2e-67 | MYB family protein |