PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058770.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 306aa    MW: 33560.8 Da    PI: 4.9565
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.8e-05279302123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++sF++   L++H +  H
  XP_028058770.1 279 HPCKSCNRSFNSENALESHTKAkH 302
                     78*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MDFWGVEVKS GDPCPVEPGE GRILHLSQAC LGEVKKDKRT ESVYLYATID GKKLVLGTLS  60
PEKFPQQQFD LVFNKKFELA HNWKHGSVYF YGYRCDNPID ETEDDSEDEL EDELPVIAAD  120
SGKSKSQAKH EKPPAAESAN TAKPVAVGSK QKVKIVEPKK DVKTVEEIGS SDDDFETDSS  180
EYASESDEDE DSDSENEGKT EDDDEDKETP KKVEPSKKRP AESATETPGP DKKAKSITPQ  240
ITDTKKGNVH VATPHPSKKS GKTPANQPNQ QTPKSAGSHP CKSCNRSFNS ENALESHTKA  300
KHSAGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.28e-32C2H2 family protein