PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028058769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 308aa MW: 33775.1 Da PI: 4.9565 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.8e-05 | 281 | 304 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C++sF++ L++H + H XP_028058769.1 281 HPCKSCNRSFNSENALESHTKAkH 304 78*****************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 308 aa Download sequence |
MDFWGVEVKS GDPCPVEPGE GRILHLSQAC LGEVKKDKRT ESVYLYATID GKKLVLGTLS 60 PEKFPQQQFD LVFNKKFELA HNWKHGSVYF YGYRCDNPID EITTEDDSED ELEDELPVIA 120 ADSGKSKSQA KHEKPPAAES ANTAKPVAVG SKQKVKIVEP KKDVKTVEEI GSSDDDFETD 180 SSEYASESDE DEDSDSENEG KTEDDDEDKE TPKKVEPSKK RPAESATETP GPDKKAKSIT 240 PQITDTKKGN VHVATPHPSK KSGKTPANQP NQQTPKSAGS HPCKSCNRSF NSENALESHT 300 KAKHSAGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G44750.2 | 7e-32 | C2H2 family protein |