PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB_related | ||||||||
Protein Properties | Length: 97aa MW: 11105.6 Da PI: 7.5065 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.3 | 9.4e-10 | 6 | 53 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqk 46 +W++ +l+ +a + +G +W+ Iar +g g++ +++k ++ + XP_028058740.1 6 SNWSAKQNKLFENALAIYGHMeapeRWENIARAVG-GKSVEEVKRHYEM 53 58*****************77**************.***********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MGSNSSNWSA KQNKLFENAL AIYGHMEAPE RWENIARAVG GKSVEEVKRH YEMLVEDVNQ 60 IESGQVPLPY YKPVAGSNKG YKFMDDQEQR LKCLKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 1e-31 | MYB_related family protein |