PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058690.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 456aa MW: 51442 Da PI: 6.8369

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.4	1.2e-35	47	189	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_028058690.1 47 LPAGVKFDPTDQELI-EHLEAKVEAKDskshplIDEFIPtIEGEdGICYTHPERLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 139 799**********.99***996665443333333666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_028058690.1 140 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MNKNQLGGSI SSSDLIDAKL EEHQLCGSKQ CPGCGHKLEG KPDWVGLPAG VKFDPTDQEL 60 IEHLEAKVEA KDSKSHPLID EFIPTIEGED GICYTHPERL PGVTRDGLSR HFFHRPSKAY 120 TTGTRKRRKI QTECDLQGGE TRWHKTGKTR PVMVNGKQKG CKKILVLYTN FGKNRKPEKT 180 NWVMHQYHLG QYEEEKEGEL VVSKIFYQTQ PRQCNWSERS TGTTATTTGE GNSEPISRRD 240 SGGSGSCSSK EVINQRDELS AAAGVGAAMS SYSAMDIQQL KADQFSFAPF RKSFDEVGVS 300 EASTVREAQA SVTCEERDFH EHQRAHHVTH EQHQHQHQHQ HQQQQHQMAT TAFHISRPSH 360 SISTIISPPP LHHTSIILDE VSRLMLQNEN FQQQQQQQQQ HHKMGGRSAS GLEELIMGCT 420 STDMKEQESS ITNPQESDWL KYSNFWPDPD NPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MNKNQLGGSI SSSDLIDAKL EEHQLCGSKQ CPGCGHKLEG KPDWVGLPAG VKFDPTDQEL  60
IEHLEAKVEA KDSKSHPLID EFIPTIEGED GICYTHPERL PGVTRDGLSR HFFHRPSKAY  120
TTGTRKRRKI QTECDLQGGE TRWHKTGKTR PVMVNGKQKG CKKILVLYTN FGKNRKPEKT  180
NWVMHQYHLG QYEEEKEGEL VVSKIFYQTQ PRQCNWSERS TGTTATTTGE GNSEPISRRD  240
SGGSGSCSSK EVINQRDELS AAAGVGAAMS SYSAMDIQQL KADQFSFAPF RKSFDEVGVS  300
EASTVREAQA SVTCEERDFH EHQRAHHVTH EQHQHQHQHQ HQQQQHQMAT TAFHISRPSH  360
SISTIISPPP LHHTSIILDE VSRLMLQNEN FQQQQQQQQQ HHKMGGRSAS GLEELIMGCT  420
STDMKEQESS ITNPQESDWL KYSNFWPDPD NPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-173	NAC family protein