PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058536.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 740aa MW: 80901 Da PI: 7.2722

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.7e-09	513	550	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ L++++gL+ +qV++WF N R + XP_028058536.1 513 FEHflHPYPSDADKHLLSRQTGLSRNQVSNWFINARVR 550 664459******************************88 PP
2	BELL	120.9	5.7e-39	374	445	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r ++q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g+g+a pYt+lA+ka+SrhFrcLkdaia q+ XP_028058536.1 374 DRIDHQRRKVKLLSMLDEVDRRYNRYCEQMQMVVNSFDLVMGYGAAMPYTALAQKAMSRHFRCLKDAIAAQL 445 5789*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MSQQDYHHQS IFNFSNGFER AQQEQQIRRD KLRAQGFEPP PPLVAIEDEV SGGIPVYETA 60 GMLSEMFNFQ AGATTAATQL LENQISQNYG NTRPPPSPLP PPPPSVEARV SGEWYRQGMV 120 VGGGLGPMSD SKNQNIVNNH HHHHQISSMN ADSAAAMQLF LMNPQQQQQL PRSPPSPSQS 180 HHHHPHETSS TLHMLLPNPN PSAFHNNQIG LSSSSSSQFT WVPDGGHERG TGGGVVEGQG 240 LSLSLSSSLQ HLEAAKAEEL RMGEGGIMFF NQGGGASSDY QYKNLGGGSD HHQVHVGFGS 300 SPLGVVNGLR NSKYVKAAQE LLEEFCCVGR AHFKKNKFGR QNTNNPNPNP TSSAAAAGGG 360 SSSSKDLGPL SAADRIDHQR RKVKLLSMLD EVDRRYNRYC EQMQMVVNSF DLVMGYGAAM 420 PYTALAQKAM SRHFRCLKDA IAAQLKHSCE LLGDKDAGTS GVTKGETPRL RLLEQSLRQQ 480 REFHQMRMID QEAWRPQRGL PDRSVNILRA WLFEHFLHPY PSDADKHLLS RQTGLSRNQV 540 SNWFINARVR LWKPMVEDMY QQETKEEEES GEEEGQINHS SITGGLAQTP TPPPISTTTT 600 TTTSTSTLSP SVKRSQINAL DSDTSLLAIN TQCFSENQAK QPNFNTTISA TTTAIAPLVV 660 QSFTTSHEAD TCRRGSMVGS HYRTNTAIAT ATTLTGNGDM GSTQIRFGPT GGDVSLTLGL 720 RHAGNVPEKS PFSVRDFGAC

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MSQQDYHHQS IFNFSNGFER AQQEQQIRRD KLRAQGFEPP PPLVAIEDEV SGGIPVYETA  60
GMLSEMFNFQ AGATTAATQL LENQISQNYG NTRPPPSPLP PPPPSVEARV SGEWYRQGMV  120
VGGGLGPMSD SKNQNIVNNH HHHHQISSMN ADSAAAMQLF LMNPQQQQQL PRSPPSPSQS  180
HHHHPHETSS TLHMLLPNPN PSAFHNNQIG LSSSSSSQFT WVPDGGHERG TGGGVVEGQG  240
LSLSLSSSLQ HLEAAKAEEL RMGEGGIMFF NQGGGASSDY QYKNLGGGSD HHQVHVGFGS  300
SPLGVVNGLR NSKYVKAAQE LLEEFCCVGR AHFKKNKFGR QNTNNPNPNP TSSAAAAGGG  360
SSSSKDLGPL SAADRIDHQR RKVKLLSMLD EVDRRYNRYC EQMQMVVNSF DLVMGYGAAM  420
PYTALAQKAM SRHFRCLKDA IAAQLKHSCE LLGDKDAGTS GVTKGETPRL RLLEQSLRQQ  480
REFHQMRMID QEAWRPQRGL PDRSVNILRA WLFEHFLHPY PSDADKHLLS RQTGLSRNQV  540
SNWFINARVR LWKPMVEDMY QQETKEEEES GEEEGQINHS SITGGLAQTP TPPPISTTTT  600
TTTSTSTLSP SVKRSQINAL DSDTSLLAIN TQCFSENQAK QPNFNTTISA TTTAIAPLVV  660
QSFTTSHEAD TCRRGSMVGS HYRTNTAIAT ATTLTGNGDM GSTQIRFGPT GGDVSLTLGL  720
RHAGNVPEKS PFSVRDFGAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-128	TALE family protein