PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058465.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 845aa MW: 93849.9 Da PI: 8.3591

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	70.4	3.3e-22	751	831	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ ev++Li++r e+++r++ k++++lWee+s+++ + g++rsp qCk+ w +l ++y++ik ek++ +++pyf++++ XP_028058465.1 751 KWKPGEVMKLINMRGELHSRFQVVKQRMALWEEISANLLADGINRSPGQCKSLWTSLVQKYEEIKGDEKSK-----KNWPYFEDMN 831 7******************************************************************95.....79****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 845 aa Download sequence
MAAFSALSLC PYNFSCRPNP NKRRFLCSLA SPSSIGTRGP KVPRKKSGRL EGAGKSMEDS 60 VQRKMEQFYE GSDGPPLRVL PIGGLGEIGM NCMLVGNYDR YILIDAGVMF PDYDELGVQK 120 IIPDTTFIRK WSHKIEAVVI THGHEDHIGA LPWVIPALDS HTPIFASSFT MELIKKRLKD 180 FGIFLPSRLK IFKTRRRFSA GPFEIEPIRV THSIPDCCGL VLRCADGTML HTGDWKIDES 240 PLDGKGFDRE ALEELSKEGV TLMMSDSTNI LSPGRTLSET VVADALLRRI SAAKGRVITT 300 QFASNIHRLG SVKAAADLTG RKLVFVGMAL RTYLDAAWKD GKAPIDPSTL VKVEDIDAYA 360 PKDLLIVTTG SQAEPRAALN LASYGSSHSL KLSKEDIILY SAKVIPGNEI RVMKMLNRIS 420 EIGSTIVMGK NEQLHTSGHG YRGELEEVLK IVKPQHFLPI HGELLFLREH ELLGKSTGIR 480 HTTLMYNDGD KAFGTSTELC IDERLRIASD GIIVVSMEIL RPQDADGSVE KTLKGRIRIT 540 TRCLWLDKGK LLDALHKAAH ASLSSCPINC PLAHMERIVS EVLRKMVRKY SSKRPEVIAI 600 AIENPAAVLS DELNARLSGK SHVGFGISAL RKVVDGHPKK RRTTDIQEEE GKTQQELEGH 660 DIEDDRLLSE EATTSGSESA EKFSLNSDGS DDFWKSFIAS SPIEQSVKDS NGSVPQEEHR 720 EKLKIEETKV DDMVEIPKCQ SKSSKPGKRN KWKPGEVMKL INMRGELHSR FQVVKQRMAL 780 WEEISANLLA DGINRSPGQC KSLWTSLVQK YEEIKGDEKS KKNWPYFEDM NKILSDLEAT 840 AAATK

Sequence ? help Back to Top

Protein Sequence Length: 845 aa Download sequence

MAAFSALSLC PYNFSCRPNP NKRRFLCSLA SPSSIGTRGP KVPRKKSGRL EGAGKSMEDS  60
VQRKMEQFYE GSDGPPLRVL PIGGLGEIGM NCMLVGNYDR YILIDAGVMF PDYDELGVQK  120
IIPDTTFIRK WSHKIEAVVI THGHEDHIGA LPWVIPALDS HTPIFASSFT MELIKKRLKD  180
FGIFLPSRLK IFKTRRRFSA GPFEIEPIRV THSIPDCCGL VLRCADGTML HTGDWKIDES  240
PLDGKGFDRE ALEELSKEGV TLMMSDSTNI LSPGRTLSET VVADALLRRI SAAKGRVITT  300
QFASNIHRLG SVKAAADLTG RKLVFVGMAL RTYLDAAWKD GKAPIDPSTL VKVEDIDAYA  360
PKDLLIVTTG SQAEPRAALN LASYGSSHSL KLSKEDIILY SAKVIPGNEI RVMKMLNRIS  420
EIGSTIVMGK NEQLHTSGHG YRGELEEVLK IVKPQHFLPI HGELLFLREH ELLGKSTGIR  480
HTTLMYNDGD KAFGTSTELC IDERLRIASD GIIVVSMEIL RPQDADGSVE KTLKGRIRIT  540
TRCLWLDKGK LLDALHKAAH ASLSSCPINC PLAHMERIVS EVLRKMVRKY SSKRPEVIAI  600
AIENPAAVLS DELNARLSGK SHVGFGISAL RKVVDGHPKK RRTTDIQEEE GKTQQELEGH  660
DIEDDRLLSE EATTSGSESA EKFSLNSDGS DDFWKSFIAS SPIEQSVKDS NGSVPQEEHR  720
EKLKIEETKV DDMVEIPKCQ SKSSKPGKRN KWKPGEVMKL INMRGELHSR FQVVKQRMAL  780
WEEISANLLA DGINRSPGQC KSLWTSLVQK YEEIKGDEKS KKNWPYFEDM NKILSDLEAT  840
AAATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein