PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25705.6 Da PI: 9.523 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrdp+ kr r++lg+f+taeeAa+a++aa +++g XP_028058387.1 24 HYRGVRKRP-WGRYAAEIRDPN---KRSRVWLGTFDTAEEAARAYDAASIEFRG 73 6********.**********93...36*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MAAKEKSNGV KGGNEKTNGV KEVHYRGVRK RPWGRYAAEI RDPNKRSRVW LGTFDTAEEA 60 ARAYDAASIE FRGPKAKTNF PFPSSQTLPI INTPNPNPNP NPNPNRSPSQ SSTVESSSPD 120 RISHAPVELD LTRRLGGSVV GTVSVAEYPV FYQRPAVTVL PYAHPALYFD ALVRSGMVSR 180 GQPYQRVGTE FDGGLGGGAL SESDSSSVVV DCNNAHESNR RKGVLDLDLN FPPPVEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 4e-26 | ERF family protein |