PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058381.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 433aa    MW: 48179.9 Da    PI: 8.4829
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.74.8e-09186206526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f+r G C++G++C FaHg
  XP_028058381.1 186 VCSDFRR-GSCSRGENCEFAHG 206
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MRPRPSPSPS SSSNPSPLSL LSLLSLSLSA LYTSLTPLLL PSFNTKSSSL SRKFHIMGSV  60
CAEQQHKLHA SHQLLLHKKS LREIDIPPRK LLSRRATAAN DSFSDMFSDS PRTAEETLLQ  120
KFLPYNGGDD DDDDDPYSSD TFRMYEFKVR RCSRSRSHDW TDCPFAHPGE KARRRDPRRY  180
NYSGTVCSDF RRGSCSRGEN CEFAHGVFEC WLHPARYRTE ACKDGKNCKR KVCFFAHSPR  240
QLRLLPPPSD GNSPPAPPQV YSPAAERMYR NSNHCCLFCH SVAASPTSTL TGVSHSSPPL  300
SPSLSPPLSP VKSRSMSGLS PISRYGSGER CGLSQFNPGA VNYKDELNEI MNSLESMNVN  360
ETPNSATNKR NLSWVDVNFN NGDDQPQFNL SPSSSSPSVS RDRFSSIKTF IDDKLNDNGL  420
ACPDLGWVND LLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-70C3H family protein