PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058103.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 309aa    MW: 35364.9 Da    PI: 6.6755
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.71.1e-1992185290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 
                     fYn+Y k  GFs+rks+ +++ ++g+++++ + Cs+eg+r ++  +  +ek+r ++a tr+gCkak++++ +      gk+++t+++ +HnHela
  XP_028058103.1  92 FYNAYDKAKGFSIRKSRFNTN-KEGKVVSSLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAKFRIRYDAdageGGKYVMTHFVADHNHELA 185
                     9****************9999.66669999999*******99988877899999****************987677789**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAPAEVKREG DDYDIPNEAD DIRLMNESRA EPYHGFEAGP SNEEATNMNV EDGRADVKKE  60
MVDDAHRNDM VGDVERVILE QKFDSVEDGE AFYNAYDKAK GFSIRKSRFN TNKEGKVVSS  120
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAKFRIR YDADAGEGGK YVMTHFVADH  180
NHELAEQHCV MYLRSHRSLN SADKAQAMVM RNVGVKTSQI MDYMVNQSGS YENVGFIRMD  240
LHNHIQVERR AEVEDGDAQR RVRWFTYVQN LMLMHVFFTS MMCVTITSYK ICSGQIQNRG  300
PTTQSLVMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-21FAR1 family protein