PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028057687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 186aa MW: 20899.9 Da PI: 7.893 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.5 | 3.1e-40 | 11 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+l+r+C+++C +apyf +++pkkfa vhk+FGasnv+k+l ++pee+red+++slv+eAear+rdPvyG++g i lq+++ +l+++la XP_028057687.1 11 SCAACKFLKRRCSPNCLFAPYFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLVFEAEARLRDPVYGCIGAIALLQKKMVELQHDLA 105 6*********************************************************************************************9 PP DUF260 96 llkee 100 ++++ XP_028057687.1 106 IARTR 110 98865 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 186 aa Download sequence |
MKGQEPRSSS SCAACKFLKR RCSPNCLFAP YFRSDEPKKF AKVHKVFGAS NVSKILIEVP 60 EEQREDTVNS LVFEAEARLR DPVYGCIGAI ALLQKKMVEL QHDLAIARTR LARYVVAKPS 120 HPHQHQHQHH PLLLLDNNNH DHIVVSPLVD LPGVCSDGWV ESFNQNSLES YQGGSMGELS 180 QFPFPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11090.1 | 3e-64 | LBD family protein |