PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028057591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 277aa MW: 30309.3 Da PI: 8.087 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5.1e-21 | 62 | 111 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g XP_028057591.1 62 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAALAYDEAALRFKG 111 8********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MVSALTRIIG TTQTHDHNLN VPAVPVQSTT ASAISDHRPS HATQHQGGGG GGGGGDMIRR 60 KHYRGVRQRP WGKWAAEIRD PKKAARVWLG TFDTAEDAAL AYDEAALRFK GTKAKLNFPA 120 RLQFQGITDD HVSSGHYFFN TSHHEAGDHS TINITIPNST RPPPVPPMSM SMSMSTSMGQ 180 QESYPDLLQY AQLLSSDDAE FPYFTSALYN QQQQQFYVSP SSTSAPPFSS ITSDPQQQQQ 240 QQQQQQQQQG LLNSSSQSGS SSSTSDFLKH GKHFGST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07310.1 | 2e-33 | ERF family protein |