PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057548.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 485aa MW: 55669 Da PI: 7.1831

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.4	2.6e-19	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+g ka+++++ + +gk++vt+++ +HnHela XP_028057548.1 92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGYKAQFRIRYDAdvgeRGKYVVTHFVADHNHELA 185 9**************9999.666699999*****99988877899999************987777899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MAPVEVKREG DDYDIPNEAD DIRLMNESRA EPYHGCEAGP SNEEATNMNV EAGGANVKKE 60 MVDDAHRNDM VGDVERAILE QKFDSVKDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGYKAQFRIR YDADVGERGK YVVTHFVADH 180 NHELAEQHCV MYLRSHRSLN NADKAQAMAM HNVGVKTSQI MHYMLNQSGS YENVGFIRMD 240 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VCNDNKLQNL FWADSKSRAD 300 HAKFGDVLIF DLTYRTNAYK KPFVMLASVT SHFKTAIFAC VLLANETIDT YTWVLETFME 360 AMGNKAPVFV LTDGHKAMRE AIRRVFPDAR HRLCNWNLEK NDVSNVHKSV FAHAFKKCMD 420 MEMDKTKFEH GWTTMVEIFG LQTNSWVLET YEKRHMWAEA CGHFFAGINN TPRSESVNAY 480 FNPFL

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MAPVEVKREG DDYDIPNEAD DIRLMNESRA EPYHGCEAGP SNEEATNMNV EAGGANVKKE  60
MVDDAHRNDM VGDVERAILE QKFDSVKDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGYKAQFRIR YDADVGERGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRSLN NADKAQAMAM HNVGVKTSQI MHYMLNQSGS YENVGFIRMD  240
LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VCNDNKLQNL FWADSKSRAD  300
HAKFGDVLIF DLTYRTNAYK KPFVMLASVT SHFKTAIFAC VLLANETIDT YTWVLETFME  360
AMGNKAPVFV LTDGHKAMRE AIRRVFPDAR HRLCNWNLEK NDVSNVHKSV FAHAFKKCMD  420
MEMDKTKFEH GWTTMVEIFG LQTNSWVLET YEKRHMWAEA CGHFFAGINN TPRSESVNAY  480
FNPFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-71	FAR1 family protein