PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057117.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 473aa MW: 55044.1 Da PI: 8.5796

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.6	7e-07	19	104	8	88
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 ++ GF +++++s + +++ + + C ++g+ + +kk ++k + + ++++ C +l+ +k ++ w+v+ HnH+ XP_028057117.1 19 RKKGFVIVIKTSDYG-GGHRTPRIFLACERSGQYRAHKKLkeddsNKKIVKITGTKKCRCPFELMARKLMaNDDWMVDVACGMHNHA 104 688****999998.45557788899*998888774444344444455667777777777766557*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MWVFKNKEEL LNWVWDVGRK KGFVIVIKTS DYGGGHRTPR IFLACERSGQ YRAHKKLKED 60 DSNKKIVKIT GTKKCRCPFE LMARKLMAND DWMVDVACGM HNHAPTKHFE GHLFVVRLSE 120 EETSLLVDLS KSMVKPKEIL VTLKRNDALN VTTMKTIYNV CHRNNVIEKA QMQQLLGELE 180 KHNYIKRHRC DNNTMTATDL FWAHPVSLDL LRSFPKVLIM DCTYKTNRYH LPLLEIVSVT 240 SIDILFDDIA IPEVIVMDME LALMNAIDSV FSASRHLLCR WHIGRNVLAK CKKMFKSKEE 300 CDKFISLWNF LILFLTELEY NEHLARLLAD FDTYSYAVAE SEHAKLKRQL GSNQVIFECS 360 WPKIHSLLEL QHIDIKASFE KSLTIVQHQF KPSHFRELRD NISRIALDHV LAESKRVNDV 420 GINALVCGYV VRRTHGIKEL THILSYFEPN PEYHRWMTMP DMGHLIASCY NVV

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MWVFKNKEEL LNWVWDVGRK KGFVIVIKTS DYGGGHRTPR IFLACERSGQ YRAHKKLKED  60
DSNKKIVKIT GTKKCRCPFE LMARKLMAND DWMVDVACGM HNHAPTKHFE GHLFVVRLSE  120
EETSLLVDLS KSMVKPKEIL VTLKRNDALN VTTMKTIYNV CHRNNVIEKA QMQQLLGELE  180
KHNYIKRHRC DNNTMTATDL FWAHPVSLDL LRSFPKVLIM DCTYKTNRYH LPLLEIVSVT  240
SIDILFDDIA IPEVIVMDME LALMNAIDSV FSASRHLLCR WHIGRNVLAK CKKMFKSKEE  300
CDKFISLWNF LILFLTELEY NEHLARLLAD FDTYSYAVAE SEHAKLKRQL GSNQVIFECS  360
WPKIHSLLEL QHIDIKASFE KSLTIVQHQF KPSHFRELRD NISRIALDHV LAESKRVNDV  420
GINALVCGYV VRRTHGIKEL THILSYFEPN PEYHRWMTMP DMGHLIASCY NVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-10	FAR1 family protein