PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056985.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 485aa MW: 55466.8 Da PI: 6.6011

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.9	2.6e-21	95	188	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rksk +++ ++g++++r + Cs+eg+r ++ + +ek++ ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028056985.1 95 FYNAYAKAKGFSIRKSKFNTN-KEGKVVSRLWLCSMEGHRLPKYLDrvAEKSKAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHELA 188 9**************9999.666699999*****99988877888999************987677789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MCSIAPAEVK REGDDYDIPN EADDIRLMNE SRAEPYHGCE AGPSNEEATN MNVEDGGADM 60 KKEMVDDAHR NDMVGDVERA ILEQKFDSVE HGEAFYNAYA KAKGFSIRKS KFNTNKEGKV 120 VSRLWLCSME GHRLPKYLDR VAEKSKAPKA LTRVGCKAQF RIRYDADAGE GGKYVVTHFV 180 ADHNHELAEQ HCVMYLRSHR CLNSADKAQV MAMRNVGMKT SQIMDYMVNQ SGSYENVGFI 240 HTDLHNHIQA KRRAEVEDGD AQDSKSRADY VKFGDVLIFD STYRTNAYKK PFVMLAGVTS 300 HFRITIFACV LLVNETIDTY TWVLETFMKA MGNKAPVSVL TDRDKAMREA IRRCMDMEMD 360 ETKFEHGWMT MVENFGLQTN SWVLETYEKR HMWAEAYMRG HFFAGMKSTQ RSESMNAYFN 420 PFLQHKLKLY KFVRHYDRAL ARIRYNEAGD DAETNNTFLV LLSGCMNFGC NEQLLLSVAG 480 ELISS

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MCSIAPAEVK REGDDYDIPN EADDIRLMNE SRAEPYHGCE AGPSNEEATN MNVEDGGADM  60
KKEMVDDAHR NDMVGDVERA ILEQKFDSVE HGEAFYNAYA KAKGFSIRKS KFNTNKEGKV  120
VSRLWLCSME GHRLPKYLDR VAEKSKAPKA LTRVGCKAQF RIRYDADAGE GGKYVVTHFV  180
ADHNHELAEQ HCVMYLRSHR CLNSADKAQV MAMRNVGMKT SQIMDYMVNQ SGSYENVGFI  240
HTDLHNHIQA KRRAEVEDGD AQDSKSRADY VKFGDVLIFD STYRTNAYKK PFVMLAGVTS  300
HFRITIFACV LLVNETIDTY TWVLETFMKA MGNKAPVSVL TDRDKAMREA IRRCMDMEMD  360
ETKFEHGWMT MVENFGLQTN SWVLETYEKR HMWAEAYMRG HFFAGMKSTQ RSESMNAYFN  420
PFLQHKLKLY KFVRHYDRAL ARIRYNEAGD DAETNNTFLV LLSGCMNFGC NEQLLLSVAG  480
ELISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-64	FAR1 family protein