PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056974.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 614aa MW: 67912.9 Da PI: 6.9223

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	412	449	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + XP_028056974.1 412 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 449 554459******************************88 PP
2	BELL	103.2	1.8e-33	283	352	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e +kkk++L+s+l+eV++rYk y++q+q+v++sFe vagl +a+pY++lAlka+S+hFr+Lk+ai++q+ XP_028056974.1 283 GEQRKKKSRLISMLNEVYRRYKYYYQQMQAVVASFESVAGLSNAAPYANLALKAMSKHFRSLKNAITDQL 352 5789***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MADGFEPYHV PQQSRRDKLR VVVQTDPSGC AGLLPLYDPS LFPSDLLSCA NLHHHQNNHN 60 PLLDEPTKPN PTHNSTVKRE GVNLMGYVGS SSSTSQQQQQ HIYMDPQSSL HMNPSSIHDI 120 SNNPFLFTPQ NLRVYDQSFN GDEVVVYKPE PLSLSLSSHQ THQSTLPLEL NPQRYESSIF 180 TDKVSGGVYV VPSIVGGGGG GGSGANDLSR SSVPLGPFTG YGSILKGSRF LKPAQQLLEE 240 ICDVGLGIYA EKITEDSGLM DAPVENLGGS GVVEESVSGG DGGEQRKKKS RLISMLNEVY 300 RRYKYYYQQM QAVVASFESV AGLSNAAPYA NLALKAMSKH FRSLKNAITD QLRFTGKAQN 360 YRKDETLSFG NSEILYSHRP VHNSGFLEHQ PVWRPQRGLP ERAVTVLRAW LFEHFLHPYP 420 TDTDKLMLAK QTGLSRSQVS NWFINARVRL WKPMVEEIHM LETRQGQKAL QREEQQNTDG 480 PNDHLPTATS LASENPSTST KRAQDLPSKR TRNEFPDIYM GTEEPVNLSY ENLSRHQQMG 540 VGVNTASGSG GVSLTLGLHQ NNGIGLSEPF PVNAARRFGL EANTEGYVMG SFEAQNRQFG 600 RDMIGGQLLH DFVG

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MADGFEPYHV PQQSRRDKLR VVVQTDPSGC AGLLPLYDPS LFPSDLLSCA NLHHHQNNHN  60
PLLDEPTKPN PTHNSTVKRE GVNLMGYVGS SSSTSQQQQQ HIYMDPQSSL HMNPSSIHDI  120
SNNPFLFTPQ NLRVYDQSFN GDEVVVYKPE PLSLSLSSHQ THQSTLPLEL NPQRYESSIF  180
TDKVSGGVYV VPSIVGGGGG GGSGANDLSR SSVPLGPFTG YGSILKGSRF LKPAQQLLEE  240
ICDVGLGIYA EKITEDSGLM DAPVENLGGS GVVEESVSGG DGGEQRKKKS RLISMLNEVY  300
RRYKYYYQQM QAVVASFESV AGLSNAAPYA NLALKAMSKH FRSLKNAITD QLRFTGKAQN  360
YRKDETLSFG NSEILYSHRP VHNSGFLEHQ PVWRPQRGLP ERAVTVLRAW LFEHFLHPYP  420
TDTDKLMLAK QTGLSRSQVS NWFINARVRL WKPMVEEIHM LETRQGQKAL QREEQQNTDG  480
PNDHLPTATS LASENPSTST KRAQDLPSKR TRNEFPDIYM GTEEPVNLSY ENLSRHQQMG  540
VGVNTASGSG GVSLTLGLHQ NNGIGLSEPF PVNAARRFGL EANTEGYVMG SFEAQNRQFG  600
RDMIGGQLLH DFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-103	TALE family protein