PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028056859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 188aa MW: 20607.6 Da PI: 9.8544 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.7 | 0.0016 | 44 | 66 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H XP_028056859.1 44 FECKTCNRQFPSFQALGGHRASH 66 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.7 | 0.00019 | 96 | 118 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F+ L H+r+H XP_028056859.1 96 HECSICGQEFPLGQALGGHMRRH 118 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MVYLGMKRGR EEEFDTTTMA NCLMLLSHAA GGFKSRANSP SRVFECKTCN RQFPSFQALG 60 GHRASHKRLR LMGGGGLNHH QAAAGQSPQP SKPKTHECSI CGQEFPLGQA LGGHMRRHRA 120 AATPVDENNQ PPELTLSPSQ SQQEAPVVKK SNSRRILCLD LNLAPVENDF DFQLLPVLIS 180 KPLLRVGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 2e-41 | C2H2 family protein |