PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028056815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 913aa MW: 100162 Da PI: 7.9464 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.5 | 5.8e-19 | 334 | 433 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_028056815.1 334 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDLKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRIE-PEGK 426 89**************************555566778***************9989999999***9.********************987.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_028056815.1 427 LVMGFRK 433 7777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 913 aa Download sequence |
MSSSSSIKFC FNSNCKDVLE RSRKGWRRRT GEFADLCDRC ASAYEEGKFC ETFHLNASGW 60 RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CITCARKSFI LTPNPAWPPP SLFLPVLPER 120 IKDFSTKNWC QIAGSGPVPW RQAPSLFTSS AAQSDFQPRM PFDVDIPSGI DRLIGSERLS 180 ASSLEKKKVE DSSERLMNGS LKLGASEILE NGINSGEQAS PSINVPQKSS FLKIDTSTSH 240 FGLGVSSSSL NESNDQTKVS GCHAPRPTPP PLIGKQFCGH NGVDSSGETQ IRNGRPRSDA 300 RSRNQLLPRY WPRITDQELQ QISGNSNSVI TPLFEKMLSA SDAGRIGRLV LPKKCAEAYF 360 PPISQPEGLP LKVQDLKGKE WIFQFRFWPN NNSRMYVLEG VTPCIQSMQL QAGDTVTFSR 420 IEPEGKLVMG FRKASITPSS NQGNETANAS NGISTNGDVS AKKIKAGEVL STHQLKGNLV 480 SPGFSSIDQA NSADQASPLS KDDKSGYKAK EVLGAKSSFR NKRKNSILGS KSKRLRIEKE 540 DLIELKLTWE QAQGLLRPPL NSVPSVVVIE GFEVEEYEDA PIIGRPTIFA TDPMGENIQW 600 AQCEDCFKWR KIPADAFLPA RWTCSENSWD PERSLCSVAQ ELTAEQLEDL IPSSNRAASK 660 KMKVAKQDPD SVEALEGLDA LANLAIQEEG EALPASSSQA TTKHPRHRPG CTCIVCIQPP 720 SGKGPKHKQT CTCNVCLTVK RRFRTLMMRR EQKQSEKDAE TARQKSQQHP LLPETLLDDN 780 NGGSISPKQK IPSSEDPDDD LSRMRPSLPT FKGQIDLNIQ PERDEELSPG SDSGSMMRLV 840 QDATERYLRQ QRLTNPNRNS SGNQLQLGGI GIGGNLRNNV SVAIGSSSHQ EAEAECSVPL 900 NSNALGSTSA AER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30470.1 | 1e-171 | B3 family protein |