PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056814.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 914aa MW: 100290 Da PI: 7.9464

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.8e-19	334	433	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_028056814.1 334 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDLKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRIE-PEGK 426 89************************555566778***********99899999999.*******************987.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_028056814.1 427 LVMGFRK 433 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MSSSSSIKFC FNSNCKDVLE RSRKGWRRRT GEFADLCDRC ASAYEEGKFC ETFHLNASGW 60 RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CITCARKSFI LTPNPAWPPP SLFLPVLPER 120 IKDFSTKNWC QIAGSGPVPW RQAPSLFTSS AAQSDFQPRM PFDVDIPSGI DRLIGSERLS 180 ASSLEKKKVE DSSERLMNGS LKLGASEILE NGINSGEQAS PSINVPQKSS FLKIDTSTSH 240 FGLGVSSSSL NESNDQTKVS GCHAPRPTPP PLIGKQFCGH NGVDSSGETQ IRNGRPRSDA 300 RSRNQLLPRY WPRITDQELQ QISGNSNSVI TPLFEKMLSA SDAGRIGRLV LPKKCAEAYF 360 PPISQPEGLP LKVQDLKGKE WIFQFRFWPN NNSRMYVLEG VTPCIQSMQL QAGDTVTFSR 420 IEPEGKLVMG FRKASITPSS NQGNETANAS NGISTNGDVS AKKIKAGEVL STHQLKGNLV 480 SPGFSSIDQA NSADQASPLS KDDKSGYKAK EVLGAKSSFR NKRKNSILGS KSKRLRIEKE 540 DLIELKLTWE QAQGLLRPPL NSVPSVVVIE GFEVEEYEQD APIIGRPTIF ATDPMGENIQ 600 WAQCEDCFKW RKIPADAFLP ARWTCSENSW DPERSLCSVA QELTAEQLED LIPSSNRAAS 660 KKMKVAKQDP DSVEALEGLD ALANLAIQEE GEALPASSSQ ATTKHPRHRP GCTCIVCIQP 720 PSGKGPKHKQ TCTCNVCLTV KRRFRTLMMR REQKQSEKDA ETARQKSQQH PLLPETLLDD 780 NNGGSISPKQ KIPSSEDPDD DLSRMRPSLP TFKGQIDLNI QPERDEELSP GSDSGSMMRL 840 VQDATERYLR QQRLTNPNRN SSGNQLQLGG IGIGGNLRNN VSVAIGSSSH QEAEAECSVP 900 LNSNALGSTS AAER

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MSSSSSIKFC FNSNCKDVLE RSRKGWRRRT GEFADLCDRC ASAYEEGKFC ETFHLNASGW  60
RCCESCGKQI HCGCIVSFHM FVLLDAGGIE CITCARKSFI LTPNPAWPPP SLFLPVLPER  120
IKDFSTKNWC QIAGSGPVPW RQAPSLFTSS AAQSDFQPRM PFDVDIPSGI DRLIGSERLS  180
ASSLEKKKVE DSSERLMNGS LKLGASEILE NGINSGEQAS PSINVPQKSS FLKIDTSTSH  240
FGLGVSSSSL NESNDQTKVS GCHAPRPTPP PLIGKQFCGH NGVDSSGETQ IRNGRPRSDA  300
RSRNQLLPRY WPRITDQELQ QISGNSNSVI TPLFEKMLSA SDAGRIGRLV LPKKCAEAYF  360
PPISQPEGLP LKVQDLKGKE WIFQFRFWPN NNSRMYVLEG VTPCIQSMQL QAGDTVTFSR  420
IEPEGKLVMG FRKASITPSS NQGNETANAS NGISTNGDVS AKKIKAGEVL STHQLKGNLV  480
SPGFSSIDQA NSADQASPLS KDDKSGYKAK EVLGAKSSFR NKRKNSILGS KSKRLRIEKE  540
DLIELKLTWE QAQGLLRPPL NSVPSVVVIE GFEVEEYEQD APIIGRPTIF ATDPMGENIQ  600
WAQCEDCFKW RKIPADAFLP ARWTCSENSW DPERSLCSVA QELTAEQLED LIPSSNRAAS  660
KKMKVAKQDP DSVEALEGLD ALANLAIQEE GEALPASSSQ ATTKHPRHRP GCTCIVCIQP  720
PSGKGPKHKQ TCTCNVCLTV KRRFRTLMMR REQKQSEKDA ETARQKSQQH PLLPETLLDD  780
NNGGSISPKQ KIPSSEDPDD DLSRMRPSLP TFKGQIDLNI QPERDEELSP GSDSGSMMRL  840
VQDATERYLR QQRLTNPNRN SSGNQLQLGG IGIGGNLRNN VSVAIGSSSH QEAEAECSVP  900
LNSNALGSTS AAER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-170	B3 family protein