PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056761.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 342aa    MW: 38584.5 Da    PI: 7.2253
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.92.8e-06124144526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f++ G Ck Gd C FaHg
  XP_028056761.1 124 ACPEFRK-GNCKKGDGCEFAHG 144
                     7******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MMIGERNHFP NPTVHVPPWS LLHDPTVDNC FQYGVTNNAD EYPPYDALAA LYRYLPSNDV  60
DLDSDELVGE SDHGVDSDNF RMFEFKVRKC TRGRSHDWTE CPFAHPGEKA RRRDPRKYHY  120
SGTACPEFRK GNCKKGDGCE FAHGVFECWL HPARYRTQPC KDGSNCRRRV CFFAHSPDQL  180
RVLSSRTPGL PESYDGSPQR LAFMSPESVS PPSESPPLSP SLGSNSINEM VLSLRQLQLN  240
KVKSMPSSWG LQMSGSGFGS PRLSMTRPTF CSLPSTPTMT PTRKVIGPFD LEEEPVMERV  300
ESGRDLRVKM FEKLSRENPL DRAEPKQPSP GPDVGWVSEL VK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-124C3H family protein