PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056624.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 756aa MW: 83144.5 Da PI: 7.7877

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.4	5.4e-18	237	337	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+kvl+ sd+++ grlvlpk +ae++ +++ + ++++d +gr+W++++++ +++s++yvl+ G + +L++gD+v+F++++ ++ XP_028056624.1 237 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSDGLPIRVQDiIKGREWTFQFRFwpNNNSRMYVLE-GVTPCMQNMQLQAGDTVTFSRID-PGG 329 99************************444556667*99*****99899999999.*******************887.777 PP ..EEEEE- CS B3 91 elvvkvfr 98 +lv+++++ XP_028056624.1 330 KLVMGFRK 337 77777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MRPIKIQSDG ISNGFGPLPV NNIGDPQSSF VANRMGGTSV DKGKLVQLSK TMDAKELGHF 60 PQTPRTNNNS SIGQIKREEI MLPIGEGGTS FPEMMQQSVG PSIFVKPENS RPILGVKDMY 120 ESPAQPSLGF SLGSPLDTSN SRVPSSPSGV MEGREQNKVP PIQQGQRART ILPKPVKTGL 180 TIGSEANKGM FAQTRVPRPP ADGRGRSQLL PRYWPRITDQ ELQQISGDLN STIVPLFEKV 240 LSASDAGRIG RLVLPKACAE AYFPPISQSD GLPIRVQDII KGREWTFQFR FWPNNNSRMY 300 VLEGVTPCMQ NMQLQAGDTV TFSRIDPGGK LVMGFRKSNF VDMQDGQTSA LANGVPSGEG 360 FVSGVNDNLP THGGRTNEDS PQQLRPILEK KRNRNIGSKS KRLLLHNEEA MELRLTWEEA 420 QELLRPPPSA KPTVVMIDNH EFEEYDEPPV FGKKTTFIVR ESGEPDQWAQ CDSCSKWRRL 480 PVDVLLPPKW TCLDNIWDLS RCSCSAADEM NPNELGCLLG VSKDFKKRRN TESAKVTPEY 540 ESSGLDALAT AAVLGENAVL LADNNGDKTS EPAVAVTTKH PRHRPGCTCI VCIQPPSGKG 600 KHKPTCICNV CLTVKRRFKT LMLRRKKRQS ECEAEIAAKD DVTSKHALPL INLSENERIK 660 NRIPNDVSEN KKGQLDLNCD PNREEDILVE DGGLSMANLV RAVSIPLEMC LRQNRDTNLK 720 PCSLASEGAG ESGSCLPDEG CRLALVGEHV NKGDEE

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MRPIKIQSDG ISNGFGPLPV NNIGDPQSSF VANRMGGTSV DKGKLVQLSK TMDAKELGHF  60
PQTPRTNNNS SIGQIKREEI MLPIGEGGTS FPEMMQQSVG PSIFVKPENS RPILGVKDMY  120
ESPAQPSLGF SLGSPLDTSN SRVPSSPSGV MEGREQNKVP PIQQGQRART ILPKPVKTGL  180
TIGSEANKGM FAQTRVPRPP ADGRGRSQLL PRYWPRITDQ ELQQISGDLN STIVPLFEKV  240
LSASDAGRIG RLVLPKACAE AYFPPISQSD GLPIRVQDII KGREWTFQFR FWPNNNSRMY  300
VLEGVTPCMQ NMQLQAGDTV TFSRIDPGGK LVMGFRKSNF VDMQDGQTSA LANGVPSGEG  360
FVSGVNDNLP THGGRTNEDS PQQLRPILEK KRNRNIGSKS KRLLLHNEEA MELRLTWEEA  420
QELLRPPPSA KPTVVMIDNH EFEEYDEPPV FGKKTTFIVR ESGEPDQWAQ CDSCSKWRRL  480
PVDVLLPPKW TCLDNIWDLS RCSCSAADEM NPNELGCLLG VSKDFKKRRN TESAKVTPEY  540
ESSGLDALAT AAVLGENAVL LADNNGDKTS EPAVAVTTKH PRHRPGCTCI VCIQPPSGKG  600
KHKPTCICNV CLTVKRRFKT LMLRRKKRQS ECEAEIAAKD DVTSKHALPL INLSENERIK  660
NRIPNDVSEN KKGQLDLNCD PNREEDILVE DGGLSMANLV RAVSIPLEMC LRQNRDTNLK  720
PCSLASEGAG ESGSCLPDEG CRLALVGEHV NKGDEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	615	627	KRRFKTLMLRRKK
2	615	628	KRRFKTLMLRRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein