PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056621.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 854aa MW: 93910 Da PI: 7.6512

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.2	6.4e-18	335	435	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+kvl+ sd+++ grlvlpk +ae++ +++ + ++++d +gr+W++++++ +++s++yvl+ G + +L++gD+v+F++++ ++ XP_028056621.1 335 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSDGLPIRVQDiIKGREWTFQFRFwpNNNSRMYVLE-GVTPCMQNMQLQAGDTVTFSRID-PGG 427 99************************444556667*99*****99899999999.*******************887.777 PP ..EEEEE- CS B3 91 elvvkvfr 98 +lv+++++ XP_028056621.1 428 KLVMGFRK 435 77777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MAKICMNEAC RVTATIEWKN GWGLKSGGFA TLCFNCGSAY ENLIYCEKFH LEESGWRDCR 60 LCGKHIHCGC IASKHLHDIL DLGGVGCISC TKSLEAHSMR PIKIQSDGIS NGFGPLPVNN 120 IGDPQSSFVA NRMGGTSVDK GKLVQLSKTM DAKELGHFPQ TPRTNNNSSI GQIKREEIML 180 PIGEGGTSFP EMMQQSVGPS IFVKPENSRP ILGVKDMYES PAQPSLGFSL GSPLDTSNSR 240 VPSSPSGVME GREQNKVPPI QQGQRARTIL PKPVKTGLTI GSEANKGMFA QTRVPRPPAD 300 GRGRSQLLPR YWPRITDQEL QQISGDLNST IVPLFEKVLS ASDAGRIGRL VLPKACAEAY 360 FPPISQSDGL PIRVQDIIKG REWTFQFRFW PNNNSRMYVL EGVTPCMQNM QLQAGDTVTF 420 SRIDPGGKLV MGFRKSNFVD MQDGQTSALA NGVPSGEGFV SGVNDNLPTH GGRTNEDSPQ 480 QLRPILEKKR NRNIGSKSKR LLLHNEEAME LRLTWEEAQE LLRPPPSAKP TVVMIDNHEF 540 EEYDEPPVFG KKTTFIVRES GEPDQWAQCD SCSKWRRLPV DVLLPPKWTC LDNIWDLSRC 600 SCSAADEMNP NELGCLLGVS KDFKKRRNTE SAKVTPEYES SGLDALATAA VLGENAVLLA 660 DNNGDKTSEP AVAVTTKHPR HRPGCTCIVC IQPPSGKGKH KPTCICNVCL TVKRRFKTLM 720 LRRKKRQSEC EAEIAAKDDV TSKHALPLIN LSENERIKNR IPNDVSENKK GQLDLNCDPN 780 REEDILVEDG GLSMANLVRA VSIPLEMCLR QNRDTNLKPC SLASEGAGES GSCLPDEGCR 840 LALVGEHVNK GDEE

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MAKICMNEAC RVTATIEWKN GWGLKSGGFA TLCFNCGSAY ENLIYCEKFH LEESGWRDCR  60
LCGKHIHCGC IASKHLHDIL DLGGVGCISC TKSLEAHSMR PIKIQSDGIS NGFGPLPVNN  120
IGDPQSSFVA NRMGGTSVDK GKLVQLSKTM DAKELGHFPQ TPRTNNNSSI GQIKREEIML  180
PIGEGGTSFP EMMQQSVGPS IFVKPENSRP ILGVKDMYES PAQPSLGFSL GSPLDTSNSR  240
VPSSPSGVME GREQNKVPPI QQGQRARTIL PKPVKTGLTI GSEANKGMFA QTRVPRPPAD  300
GRGRSQLLPR YWPRITDQEL QQISGDLNST IVPLFEKVLS ASDAGRIGRL VLPKACAEAY  360
FPPISQSDGL PIRVQDIIKG REWTFQFRFW PNNNSRMYVL EGVTPCMQNM QLQAGDTVTF  420
SRIDPGGKLV MGFRKSNFVD MQDGQTSALA NGVPSGEGFV SGVNDNLPTH GGRTNEDSPQ  480
QLRPILEKKR NRNIGSKSKR LLLHNEEAME LRLTWEEAQE LLRPPPSAKP TVVMIDNHEF  540
EEYDEPPVFG KKTTFIVRES GEPDQWAQCD SCSKWRRLPV DVLLPPKWTC LDNIWDLSRC  600
SCSAADEMNP NELGCLLGVS KDFKKRRNTE SAKVTPEYES SGLDALATAA VLGENAVLLA  660
DNNGDKTSEP AVAVTTKHPR HRPGCTCIVC IQPPSGKGKH KPTCICNVCL TVKRRFKTLM  720
LRRKKRQSEC EAEIAAKDDV TSKHALPLIN LSENERIKNR IPNDVSENKK GQLDLNCDPN  780
REEDILVEDG GLSMANLVRA VSIPLEMCLR QNRDTNLKPC SLASEGAGES GSCLPDEGCR  840
LALVGEHVNK GDEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	713	725	KRRFKTLMLRRKK
2	713	726	KRRFKTLMLRRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein