PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028056545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 142aa MW: 15811.2 Da PI: 7.5988 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.8 | 1.6e-19 | 16 | 67 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd ++ +r++lg+f taeeAa+a+++a+ +++g+ XP_028056545.1 16 KYRGVRRRP-WGKFAAEIRD----SaRHgARVWLGTFNTAEEAARAYDRAAYAMRGH 67 8********.**********....33236**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MEEDFKSKDE KGGDVKYRGV RRRPWGKFAA EIRDSARHGA RVWLGTFNTA EEAARAYDRA 60 AYAMRGHLSI LNFPEEYNLP RGGSSAMSSS SSSSSSSSSS SSSSSSATCT SEHGKQVFEF 120 EYYDDKLLEE LLESGEKKNK RQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43410.1 | 4e-26 | ERF family protein |