PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056450.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 619aa MW: 70987 Da PI: 7.7312

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.3	1.5e-19	31	115	1	86
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 +fYn+Y+ ++ Fs+r+s+ +ks ++g+it+r+fvC+keg+r +k++ ++++r+e rtgC+a+l++k ++ +k v +++++Hn XP_028056450.1 31 DFYNAYGGRLCFSIRRSYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnIEKNFVGDFVEQHN 115 6******************9.6667************9999.999**************99988999*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MELNNVENEE GDCDWKPRVR MTFDIEQEAY DFYNAYGGRL CFSIRRSYVN KSKEGQITSR 60 QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIEKNFVGDF VEQHNLIFVP 120 AECAHMLPSQ RKISASQATE IDLAEKSGIY LNAAFELMGS EVGGRELPGF TKLDQKNYLR 180 TKRQNSLVYG EASSILQYFR DKSLENPSFF YLVQLDNEEH FTNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL NSAHKPFASF VGFNHHRETV IFGATLIYGE TANSFIWLFR RFLEAMSSKA 300 PKIIFMDQDA AMAKAIPIVM PNTNHCLCTW NLMQNALRHA NSIFKDKAVK DKGMKSVLST 360 FMYNIEDEEE FTLKWEEMLD KYKDEYVKSR EVNIEETEND SESTVYTVLD SDGIKVRKVR 420 MECDGSATCN CRKFEMKGIL CSHCLKILRD TLKFKEIPSQ YILKRWTKKA RAENVKDRYG 480 HDIKVDVRLH QTSCYRSLMA IFRVVACRVS ESAPEPPPLF SPSIPQSAPL FSSVPQLPPF 540 SPSVPQVRAS SSQFMYPAYN PSFLPHNMPF SMSSMYSVHG TYQALLNNAS GYGSQASNSP 600 AYVAETIAQN LLKLCLKCC

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MELNNVENEE GDCDWKPRVR MTFDIEQEAY DFYNAYGGRL CFSIRRSYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIEKNFVGDF VEQHNLIFVP  120
AECAHMLPSQ RKISASQATE IDLAEKSGIY LNAAFELMGS EVGGRELPGF TKLDQKNYLR  180
TKRQNSLVYG EASSILQYFR DKSLENPSFF YLVQLDNEEH FTNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHKPFASF VGFNHHRETV IFGATLIYGE TANSFIWLFR RFLEAMSSKA  300
PKIIFMDQDA AMAKAIPIVM PNTNHCLCTW NLMQNALRHA NSIFKDKAVK DKGMKSVLST  360
FMYNIEDEEE FTLKWEEMLD KYKDEYVKSR EVNIEETEND SESTVYTVLD SDGIKVRKVR  420
MECDGSATCN CRKFEMKGIL CSHCLKILRD TLKFKEIPSQ YILKRWTKKA RAENVKDRYG  480
HDIKVDVRLH QTSCYRSLMA IFRVVACRVS ESAPEPPPLF SPSIPQSAPL FSSVPQLPPF  540
SPSVPQVRAS SSQFMYPAYN PSFLPHNMPF SMSSMYSVHG TYQALLNNAS GYGSQASNSP  600
AYVAETIAQN LLKLCLKCC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-74	FAR1 family protein