PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028056050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 22908.7 Da PI: 5.7959 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 73 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g XP_028056050.1 73 SYRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFSMRG 123 69*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MDSLSTQYPN SQPLSWDQDL VFYHNNSLPF DFNDSEEMLL LGVLAEAHSS ETISSSFRAI 60 KDEEVTSKEK QKSYRGVRRR PWGKFAAEIR DSTRNGIRVW LGTFDSAEAA ALAYDQAAFS 120 MRGSTAVLNF PVETVRESMR DIKCGCEDGC SPVVALKRRH SMRNKYSVGS NKRCKVKDIK 180 VENVVVLEDL GAEYLEELLS SSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-66 | ERF family protein |